that is just a warning, it is not a problem. the results should be fine
On 11/30/15 6:28 AM, Carme Uribe Codesal wrote:
Dear FreeSurfer users,
I am trying to add a per-vertex regressor in my general lineal model
(a cortical thickness analysis with the white matter-grey matter
contrast parameter as regressor). I have no problems with the command
line mri_glmfit:
mri_glmfit --y rh.cth_corr_MMSE.mgh --fsgd cth_corr_MMSE.fsgd dods --C
PDcorr.mtx --pvr rh.wgc_corr_MMSE.mgh --surf fsaverage rh --cortex
--glmdir rh.cth_corr_MMSE.glmdir
But when I try to run mri_glmfit-sim I think it doesn't consider the
regressor (mri_glmfit-sim --glmdir lh.cth_corr_MMSE.glmdir/ --cache
1.3 abs) because I get this warning:
*WARNING: unrecognized mri_glmfit cmd option --pvr*
*
*
*
*
*WARNING: unrecognized mri_glmfit cmd option rh.wgc_corr_MMSE.mgh*
How can I run the simulation with the regressor?
Thank you very much for your help,
Carme
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