Thanks for that. On Wed, Mar 16, 2016 at 11:37 AM, Bruce Fischl <fis...@nmr.mgh.harvard.edu> wrote:
> that's a good point > On Wed, 16 Mar 2016, Martin Reuter wrote: > > > > > Although it should be mentioned that outputs (even of subfields) are > > going to change due to differences in the regular freesurfer processing, > > as the subfields stream builds upon the regular FS stream. > > > > Best, Martin > > > > > > On 03/16/2016 10:52 AM, Eugenio Iglesias wrote: > >> I only changed some details (e.g., temporary directories) that do not > affect the output. > >> > >> > >> Juan Eugenio Iglesias > >> Postdoctoral researcher BCBL > >> www.jeiglesias.com > >> www.bcbl.eu > >> > >> Legal disclaimer/Aviso legal/Lege-oharra: www.bcbl.eu/legal-disclaimer > >> > >> ----- Original Message ----- > >> From: "Bruce Fischl" <fis...@nmr.mgh.harvard.edu> > >> To: "Freesurfer support list" <freesurfer@nmr.mgh.harvard.edu> > >> Sent: Wednesday, March 16, 2016 3:49:31 PM > >> Subject: Re: [Freesurfer] FreeSurfer 6.0 > >> > >> yes, although the hippocampal stuff hasn't changed I don't think > >> (Eugenio: is that correct)? > >> > >> On Wed, 16 Mar 2016, Alan Francis wrote: > >> > >>> Bruce, with Eugenio's guidance, I downloaded 6.0 beta a few months ago > and > >>> ran the HSF method successfully. Have they retracted that version? > >>> > >>> best, > >>> > >>> Alan > >>> > >>> On Wed, Mar 16, 2016 at 9:57 AM, Bruce Fischl < > fis...@nmr.mgh.harvard.edu> > >>> wrote: > >>> actually there is no beta yet, but hopefully within a week or so > >>> On Wed, 16 Mar 2016, Alan Francis wrote: > >>> > >>> Hi Elizabeth: > >>> > >>> I ran the Hippocampal subfields on 6.0 beta. The > >>> parcellation looks great. > >>> Beta is available for download. Here is the URL: > >>> > >>> https://surfer.nmr.mgh.harvard.edu/fswiki/Download > >>> > >>> best, > >>> > >>> Alan > >>> > >>> On Wed, Mar 16, 2016 at 6:23 AM, Elisabeth Paul > >>> <elisabeth.p...@student.uva.nl> wrote: > >>> Dear ladies and gentlemen, > >>> > >>> for a research project I need to measure the volume > >>> of the different > >>> hippocampus subregions. I want to use FreeSurfer 6.0 > >>> for that but I > >>> can only find FreeSurfer 5.3 online. Is FreeSurfer > >>> 6.0 not yet > >>> released and if so, when will it be released? If it > >>> is already > >>> released, could you tell me where to find it? > >>> > >>> Thank you very much in advance. > >>> > >>> Kind regards, > >>> > >>> Elisabeth Paul > >>> > >>> _______________________________________________ > >>> Freesurfer mailing list > >>> Freesurfer@nmr.mgh.harvard.edu > >>> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > >>> > >>> > >>> The information in this e-mail is intended only for > >>> the person to whom > >>> it is > >>> addressed. If you believe this e-mail was sent to > >>> you in error and the > >>> e-mail > >>> contains patient information, please contact the > >>> Partners Compliance > >>> HelpLine at > >>> http://www.partners.org/complianceline . If the > >>> e-mail was sent to you > >>> in error > >>> but does not contain patient information, please > >>> contact the sender > >>> and properly > >>> dispose of the e-mail. > >>> > >>> > >>> > >>> > >>> -- > >>> > |~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~| > >>> > >>> Alan N. Francis PhD > >>> NIDA T32 Fellow in Computational Neuroscience > >>> Brain Imaging Center > >>> McLean Hospital > >>> Harvard Medical School > >>> 115 Mill Street, Belmont, MA 02478 > >>> al...@bwh.harvard.edu > >>> afran...@mclean.harvard.edu > >>> > >>> > >>> > >>> > |~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~| > >>> > >>> > >>> _______________________________________________ > >>> Freesurfer mailing list > >>> Freesurfer@nmr.mgh.harvard.edu > >>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > >>> > >>> > >>> The information in this e-mail is intended only for the person to whom > >>> it is > >>> addressed. If you believe this e-mail was sent to you in error and the > >>> e-mail > >>> contains patient information, please contact the Partners Compliance > >>> HelpLine at > >>> http://www.partners.org/complianceline . If the e-mail was sent to you > >>> in error > >>> but does not contain patient information, please contact the sender > >>> and properly > >>> dispose of the e-mail. > >>> > >>> > >>> > >>> > >>> -- > >>> |~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~| > >>> > >>> Alan N. Francis PhD > >>> NIDA T32 Fellow in Computational Neuroscience > >>> Brain Imaging Center > >>> McLean Hospital > >>> Harvard Medical School > >>> 115 Mill Street, Belmont, MA 02478 > >>> al...@bwh.harvard.edu > >>> afran...@mclean.harvard.edu > >>> > >>> > >>> |~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~|~| > >>> > >>> > >> _______________________________________________ > >> Freesurfer mailing list > >> Freesurfer@nmr.mgh.harvard.edu > >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > >> > >> > >> The information in this e-mail is intended only for the person to whom > it is > >> addressed. If you believe this e-mail was sent to you in error and the > e-mail > >> contains patient information, please contact the Partners Compliance > HelpLine at > >> http://www.partners.org/complianceline . If the e-mail was sent to you > in error > >> but does not contain patient information, please contact the sender and > properly > >> dispose of the e-mail. > >> > >> _______________________________________________ > >> Freesurfer mailing list > >> Freesurfer@nmr.mgh.harvard.edu > >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > >> > >> > > > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >
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