Thank you! I uploaded the subject which is labeled as SAIS_138_midline_deviation.tar.gz.
On Nov 3, 2016, at 4:46 PM, Bruce Fischl <fis...@nmr.mgh.harvard.edu<mailto:fis...@nmr.mgh.harvard.edu>> wrote: Hi Jackie that's surprising. If you upload the subject we can take a look. You could also try relabeling the aseg (i.e. changing left/right labels for thalamic voxels that are incorrect) cheers Bruce On Thu, 3 Nov 2016, Hampton, Jackie wrote: In some of my subjects, the medial pial line crosses over the hemispheres. It mislabels in both brainmask and aseg. So the part that it crosses too far over in the left hemisphere is now mislabeled. I have seen this issue in the forums before, but it didn’t seem that there was a definitive fix to the issue. I am just hoping someone will be able to give me some direction. I have tried deleting voxels to no avail. Thank you! I have attached screenshots of the issue that I am having. Jackie Hampton Clinical Research Study Assistant Nico Dosenbach, MD, PhD & Deanna Greene, PhD Department of Neurology Washington University School of Medicine 660 S. Euclid Ave. | Campus Box 8111 St. Louis, MO 63110 Phone: 314-362-4154 jackiehamp...@wustl.edu<mailto:jackiehamp...@wustl.edu> [IMAGE][IMAGE] ____________________________________________________________________________ The materials in this message are private and may contain Protected Healthcare Information or other information of a sensitive nature. If you are not the intended recipient, be advised that any unauthorized use, disclosure, copying or the taking of any action in reliance on the contents of this information is strictly prohibited. If you have received this email in error, please immediately notify the sender via telephone or return mail. _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu<mailto:Freesurfer@nmr.mgh.harvard.edu> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail. Jackie ________________________________ The materials in this message are private and may contain Protected Healthcare Information or other information of a sensitive nature. If you are not the intended recipient, be advised that any unauthorized use, disclosure, copying or the taking of any action in reliance on the contents of this information is strictly prohibited. If you have received this email in error, please immediately notify the sender via telephone or return mail.
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