It looks like you have one gigantic cluster with a value of -inf at vertex 41. How did you generate /fsdata/lme/thickness/rh.thickness.B1B7.mgh ? Have you looked at it in freeview?
On 11/11/2019 7:39 PM, Bronwyn Overs wrote: External Email - Use Caution Dear Freesurfer Mailing List, I have completed an LME analysis in matlab and have generated a number of different cluster summary files for my various contrasts. In many of resulting cluster summary files the 'Max' value for the largest cluster which encompasses most of the brain surface is reported as infinity ('-inf'). Please find an example file attached. As I was hoping to use these values to generate effect size estimates, can you please tell me what alternate value I could substitute here for 'Max'? Kind regards, Bronwyn Overs Research Assistant [cid:part1.B9307C7A.2CF4D079@mgh.harvard.edu] Neuroscience Research Australia Margarete Ainsworth Building Barker Street Randwick Sydney NSW 2031 Australia M 0411 308 769 T +61 2 9399 1725 neura.edu.au <http://neura.edu.au/> Twitter<https://twitter.com/neuraustralia> | Facebook<https://www.facebook.com/NeuroscienceResearchAustralia> | Subscribe<http://www.neura.edu.au/help-research/subscribe> _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu<mailto:Freesurfer@nmr.mgh.harvard.edu> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
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