External Email - Use Caution
Thanks Bruce for your speedy response.
I am dealing with chimp scans and therefore am trying to avoid anything to do
with Talairach. The surfaces have reconstructed pretty nicely using recon-all,
but I’d like to create an average surface now.
I will try as you suggest
Trisanna Sprung-Much
Research Associate
McGill University
MD Anderson Cancer Centre
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From: <freesurfer-boun...@nmr.mgh.harvard.edu> on behalf of "Fischl, Bruce"
<bfis...@mgh.harvard.edu>
Reply-To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
Date: Thursday, March 25, 2021 at 10:59 AM
To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
Subject: Re: [Freesurfer] make_average_subject without Talairach transform
Sure, I guess you can just run mri_average. I think also if you specify the
file name for the transform as identity.nofile to any binary that takes an lta
file, the code will internally create an identity transform.
I won’t look pretty though….
Cheers
Bruce
From: freesurfer-boun...@nmr.mgh.harvard.edu
<freesurfer-boun...@nmr.mgh.harvard.edu> On Behalf Of Trisanna Sprung-Much
Sent: Thursday, March 25, 2021 10:19 AM
To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
Subject: [Freesurfer] make_average_subject without Talairach transform
External Email - Use Caution
External Email - Use Caution
Hi there
I’d like to know if it is possible to create an average volume and average
surface of several subjects without having to incorporate the Talairach
transform and no transform at all.
Thank you,
Trisanna Sprung-Much
Research Associate
McGill University
MD Anderson Cancer Centre
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