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you cannot run tksurferfv with a tcl script. tksurferfv is just a
frontend for freeview that will take tksurfer-like options.
On 5/26/2023 9:54 AM, Robert Terziev wrote:
External Email - Use Caution
Hello,
I am trying to run an old script from the ENIGMA webpage, that was
based on freesurfer 5.1 and uses *tksurfer*.
Here is a code excerpt:
tksurfer $sub lh pial -tcl tmp.tcl
echo "labl_import_annotation \"aparc.annot\"" > tmp.tcl
echo "scale_brain 1.35" >> tmp.tcl
echo "redraw" >> tmp.tcl
echo "save_tiff "$QCdir/$sub/"rh.lat.hr.tif" >> tmp.tcl
I have found that I could try to use *tksurferfv* instead, but then I
get the error message
“Option 'tcl' not recognized. Run 'freeview -h' for more information.”
Running 'freeview -h', I don’t find a solution.
Is there a workaround for that problem?
Thank you very much in advance.
Kind regards
Robert
Freesurfer Version: freesurfer-darwin-macOS-7.2.0-20210713-aa8f76b
Plattform: macOS Ventura v13.3.1
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