On Wed, Sep 11, 2013 at 9:46 AM, Ulf Schaefer <ulf.schae...@phe.gov.uk> wrote: > Hello all > > Has anyone successfully integrated the phylib file type into Galaxy in > their local install? It's a standard file type for multiple sequence > alignment and I could not possibly be the only one who want to support > it in a local install.
Do you mean phylip with a p at the end? If so try this: http://toolshed.g2.bx.psu.edu/view/devteam/emboss_datatypes http://emboss.sourceforge.net/docs/themes/SequenceFormats.html Note however there are both strict and relaxed interpretations of the PHYLIP standard (the original version imposed taxon name limits), and also both interlaced/interleaved and sequential forms. The EMBOSS repository has "phylipnon" for non-interleaved (i.e. sequential) PHYLIP format , and "phylip" for either. Peter ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
