One further piece of the mystery I see now: The "View Data tables Registry" shows my tool's loc files, but has odd stuff for "Tool data path" and "Missing index file" columns, for example:
blast_reporting_fields [tab] /usr/local/galaxy/test/galaxy-dist/tool-data/salk.bccdc.med.ubc.ca/toolshed/repos/ddooley/blast_reporting/00d397a381f8/blast_reporting_fields.loc [tab] /usr/local/galaxy/test/galaxy-dist/tool-data ./database/tmp/tmp-toolshed-gmfcrDITxyK/blast_reporting_fields.loc [tab] ./database/tmp/tmp-toolshed-gmfcrDITxyK [tab] missing There is no galaxy-dist/database/tmp-toolshed-gmfcrDITxyK folder, if that's where its supposed to be? Is there some setting for database tmp folder cache for tools? Thanks for tips ... Damion ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/