Not sure why, but these tools fail to install inside the docker-galaxy-stable Dockerfile build:
indel_realigner unified_genotyper variant_select package_bedtools_2_19 bedtools I'm getting errors like these when executing "RUN install-repository": ############ [....] Galaxy is running. Processing: --url https://toolshed.g2.bx.psu.edu/ --name variant_filtration --revision da6e2503c62d --owner devteam HTTP Error 500: Internal Server Error {"err_msg": "Uncaught exception in exposed API method:", "err_code": 0} 2015/06/13 03:56:34 The command [/bin/sh -c install-repository "--url https://toolshed.g2.bx.psu.edu/ --name variant_filtration --revision da6e2503c62d --owner devteam"] returned a non-zero code: 1 ############ Any thoughts? Cheers, -E -- Evan F. Bollig, PhD Scientific Computing Consultant, Application Developer | Research and User Services (RUS) Supercomputing Institute for Advanced Computational Research | msi.umn.edu University of Minnesota | umn.edu boll0...@umn.edu | 612-624-1447 | Walter Lib Rm 556 ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: https://lists.galaxyproject.org/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
