Hi all - I'm trying to figure out how to script the ability to upload data
(fastq) files to Galaxy via the API.
I can get the Library's root_folder_id, but am unsure of what the API call
is to upload a file. I'm constructing this dictionary:
data = {}
data['folder_id'] = galaxyFolderId
data['create_type'] = 'file'
data['file_type'] = 'fastq'
data['upload_option'] = 'upload_paths'
data['filesystem_paths'] = fileToUpload
data['link_data_only'] = 'link_to_files'
I assume this is the correct format based on other code I've seen, but I'm
not sure what the actual submit call should be. 'api/libraries/' or
'api/folders'????
___________________________________________________________
Please keep all replies on the list by using "reply all"
in your mail client. To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
https://lists.galaxyproject.org/
To search Galaxy mailing lists use the unified search at:
http://galaxyproject.org/search/mailinglists/
