Hi, Maybe you can drop the rtree tables if you first drop the rtree_xxx triggers that belong to the data table. There are probably 6 of them. I don’t know if it helps, though. rtreecheck() https://sqlite.org/rtree.html is probably useless because you know already that the index is corrupted.
-Jukka- Lähettäjä: Isabel Kiefer <isa...@opengis.ch> Lähetetty: maanantai 14. helmikuuta 2022 13.08 Vastaanottaja: Rahkonen Jukka (MML) <jukka.rahko...@maanmittauslaitos.fi>; gdal-dev@lists.osgeo.org Aihe: Re: [gdal-dev] Corrupted geopackage Hi Jukka, Yes, exactly, there are only 78 entries in a dump to text file. In the original .gpkg-file, the rtree_XX_geom table is completely empty (no columns, no entries) - this must be where the problem comes from.. On Mon, Feb 14, 2022 at 11:59 AM Rahkonen Jukka (MML) <jukka.rahko...@maanmittauslaitos.fi<mailto:jukka.rahko...@maanmittauslaitos.fi>> wrote: Hi, And when you .dump https://www.sqlitetutorial.net/sqlite-dump/ the damaged table into a text file, do you only get 78 insert entries into it? -Jukka- Lähettäjä: Isabel Kiefer <isa...@opengis.ch<mailto:isa...@opengis.ch>> Lähetetty: maanantai 14. helmikuuta 2022 12.53 Vastaanottaja: Rahkonen Jukka (MML) <jukka.rahko...@maanmittauslaitos.fi<mailto:jukka.rahko...@maanmittauslaitos.fi>> Kopio: gdal-dev@lists.osgeo.org<mailto:gdal-dev@lists.osgeo.org> Aihe: Re: [gdal-dev] Corrupted geopackage Thanks for your suggestion, Jukka! I tried all the advice from stackoverflow. I can do ".recover", but get only the features that have been visible all along. In the original .gpkg, I cannot DROP the affected RTree-Index. It gives me the same disk malformed error. But that would also have been my initial idea... On Mon, Feb 14, 2022 at 9:26 AM Rahkonen Jukka (MML) <jukka.rahko...@maanmittauslaitos.fi<mailto:jukka.rahko...@maanmittauslaitos.fi>> wrote: Hi, Without being able to see your database it is hard to give more advice that https://stackoverflow.com/questions/18259692/how-to-recover-a-corrupt-sqlite3-database/18260642 gives. Did you try all of them? Because the problem has something to do with the spatial index I would have a try be dropping it and repeating the suggested tricks. -Jukka Rahkonen- Lähettäjä: gdal-dev <gdal-dev-boun...@lists.osgeo.org<mailto:gdal-dev-boun...@lists.osgeo.org>> Puolesta Isabel Kiefer Lähetetty: maanantai 14. helmikuuta 2022 10.17 Vastaanottaja: gdal-dev@lists.osgeo.org<mailto:gdal-dev@lists.osgeo.org> Aihe: [gdal-dev] Corrupted geopackage Hi everyone, I've a problem with a corrupted geopackage. It should contain a table with 694 entries, but only 78 are visible when opening the file with DB Browser for SQLite or QGIS. The table gpkg_ogr_contents says 694 though. When opening the .gpkg with a Notepad or similar, I can see that there are more than 78 entries. The error message in DB Browser is "database disk image is malformed in "PRAGMA "main".TABLE_INFO("rtree_XXX");" So it seems that there is a problem with the index of the concerned table. Does anyone know how to fix this? I tried https://stackoverflow.com/questions/18259692/how-to-recover-a-corrupt-sqlite3-database/18260642 but without success. Thanks in advance for your help! Isabel -- Isabel Kiefer OPENGIS.ch isa...@opengis.ch<mailto:isa...@opengis.ch>
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