Hello, default for any SNP data is:
red = coding, non-synonymous or splice site green = coding, synonymous. black is all others Thanks, Jennifer ------------------------------------------------ Jennifer Jackson UCSC Genome Bioinformatics Group ----- "Julia Meyer" <[email protected]> wrote: > From: "Julia Meyer" <[email protected]> > To: [email protected] > Sent: Friday, August 28, 2009 7:22:09 AM GMT -08:00 US/Canada Pacific > Subject: [Genome] (no subject) > > Hi, > > When looking at the SNP annotation (the Affy U133 Plus 2.0) in the > genome browser why are some SNPs colored red and green vs. black? > > Thank you, > > Julia Meyer > > ------------------------------------------------------------ > This email message, including any attachments, is for the sole use of > the intended recipient(s) and may contain information that is > proprietary, confidential, and exempt from disclosure under applicable > law. Any unauthorized review, use, disclosure, or distribution is > prohibited. If you have received this email in error please notify the > sender by return email and delete the original message. Please note, > the recipient should check this email and any attachments for the > presence of viruses. The organization accepts no liability for any > damage caused by any virus transmitted by this email. > ================================= > > > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
