Hello Jennifer,

thanks for the links. I'll try that.

Best,
Petr

On Tue, 2009-11-10 at 09:01 -0800, Jennifer Jackson wrote:
> Hello,
> 
> The complete source code tree is available, so you can compile a version for 
> your system using that.
> 
> http://genome.ucsc.edu/FAQ/FAQdownloads#download27
> http://hgdownload.cse.ucsc.edu/admin/jksrc.zip
> http://genome.ucsc.edu/admin/jk-install.html
> 
> Hope this helps,
> Jennifer
> 
> ------------------------------------------------ 
> Jennifer Jackson 
> UCSC Genome Bioinformatics Group 
> 
> ----- "Petr Danecek" <[email protected]> wrote:
> 
> > From: "Petr Danecek" <[email protected]>
> > To: "Jennifer Jackson" <[email protected]>
> > Cc: [email protected]
> > Sent: Tuesday, November 10, 2009 3:16:38 AM GMT -08:00 US/Canada Pacific
> > Subject: Re: [Genome] liftOver tool - a statically linked version?
> >
> > Hello,
> > 
> > actually, I need an executable, because we'll be working with larger
> > amounts of data. There is a binary version downloadable from
> > http://hgdownload.cse.ucsc.edu/downloads.html
> > but it does not work on my system, we have newer version of glib
> > installed. Is there a source code available or statically linked
> > executable?
> > 
> > Thanks,
> > Petr
> > 
> > 
> > On Mon, 2009-11-09 at 18:17 -0800, Jennifer Jackson wrote:
> > > Hello,
> > > 
> > > Here is the link:  http://genome.ucsc.edu/cgi-bin/hgLiftOver
> > > 
> > > Path: http://genome.ucsc.edu/  -> Utilities (left blue nav bar)  
> > ->
> > >  Batch Coordinate Conversion
> > > 
> > > Does this help? Or did you need an executable? (there is one on the
> > Downloads server)
> > > 
> > > Please let us know if you need more help. I am sure that you
> > already
> > >  know this, but I need to quickly mention for everyone's knowledge
> > that
> > >  we do not allow large, program driven use of the web interface. To
> > do
> > >  so will eventually cause an IP block for the user(s). Better to
> > either
> > >  create a mini-mirror or use the command-line version locally if
> > you
> > >  have many queries to run.
> > > 
> > > Thanks!
> > > Jennifer
> > 
> > 
> > 
> > 
> > -- 
> >  The Wellcome Trust Sanger Institute is operated by Genome Research 
> >  Limited, a charity registered in England with number 1021457 and a 
> >  company registered in England with number 2742969, whose registered 
> >  office is 215 Euston Road, London, NW1 2BE.



-- 
 The Wellcome Trust Sanger Institute is operated by Genome Research 
 Limited, a charity registered in England with number 1021457 and a 
 company registered in England with number 2742969, whose registered 
 office is 215 Euston Road, London, NW1 2BE. 
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