On 11/20/2009 06:31 PM, Maximilian Haussler wrote: > Sure that it was a UCSC alignment? You might also have a look here: > http://rana.lbl.gov/drosophila/alignments.html > You can download 12 species alignment from there.
For the final motif instances we used the UCSC alignment. We did, however, produce a comparison to the Mercator/MAVID alignment. This comparison is available in the supplemental information of the Stark, et al. paper on pages 42-43: http://www.nature.com/nature/journal/v450/n7167/extref/nature06340-s1.pdf Page 2 of this document also includes alignment information. Best, Pouya _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
