Hello Dana, This task is outside of the scope of what our set of tools can easily accomplish at this time. You might try poking around at Galaxy to see if they have a way to make this task easier:
http://main.g2.bx.psu.edu/ Here is a list of our utilities, in case any of them end up being useful to you for this task: http://genomewiki.cse.ucsc.edu/index.php/Kent_source_utilities I hope this helps to get you started. If you have any further questions, please don't hesitate to contact us again. Kayla Smith UCSC Genome Bioinformatics Group ----- "dana j fraser" <[email protected]> wrote: > Hi, > I am looking for a way to determine amino acid change for SNPs not > present > in the current dbSNP release. The starting point would either be a > chromosomal map position or the SNP flanking sequence. Is there a way > to > do this within the browser as well as a way to automate the process > enabling larger numbers of SNPs to be analyzed? > > Regards, > Dana > > Dana J. Fraser > > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
