That's ok! I scratched my head for a while but the compression is impressive! 4 time less than the current version! That's going to be sweet.
Thanks guys for your help. Marco On 11/21/09 6:28 PM, "Jim Kent" <[email protected]> wrote: Hi Marco - sorry, I got a little ahead of things, and gave you the version that generates compressed files that won't work with the browser until *next* week! On Nov 21, 2009, at 3:54 PM, Blanchette, Marco wrote: > Thanks Jim for the rapid answer. The binary seems to work under Snow > Leopard Sever 10.6.2. However, I think that something is broken... > > When I generated the bigWig from example 2 from > http://genome.ucsc.edu/goldenPath/help/bigWig.html > I created a bigFile that triggers some error from the Genome browser. > > This seems to be specific for the Darwin binary in the bigSuit.zip > as if I do the same procedure using the downloaded binary on a linux > box, the bigWig file is fine. > > Moreover, the file generated by the bedGraph2bigWig on the Xserver > is 16 MB large while the file generated on the linux box is 78 Mb > large. > > Any clue? > > > On 11/21/09 2:58 PM, "Jim Kent" <[email protected]> wrote: > > Hi - I just put them in the file in > http://hgwdev.cse.ucsc.edu/~kent/exe/macIntel/bigSuite.zip > > On Nov 21, 2009, at 12:44 PM, Blanchette, Marco wrote: > >> Are the source code for the newly developed Bed and Wig file >> manipulation tools available for non-Linux user? Is there a way to >> get them running on other *nix boxes (Darwin for instance!). >> >> We are running our pipelines on an Xserver and I would love to be >> able to use the bedGraphToBigWig application! >> >> Thanks >> -- >> Marco Blanchette, Ph.D. >> Assistant Investigator >> Stowers Institute for Medical Research >> 1000 East 50th St. >> >> Kansas City, MO 64110 >> >> Tel: 816-926-4071 >> Cell: 816-726-8419 >> Fax: 816-926-2018 >> >> _______________________________________________ >> Genome maillist - [email protected] >> https://lists.soe.ucsc.edu/mailman/listinfo/genome > > > > -- > Marco Blanchette, Ph.D. > Assistant Investigator > Stowers Institute for Medical Research > 1000 East 50th St. > > Kansas City, MO 64110 > > Tel: 816-926-4071 > Cell: 816-726-8419 > Fax: 816-926-2018 -- Marco Blanchette, Ph.D. Assistant Investigator Stowers Institute for Medical Research 1000 East 50th St. Kansas City, MO 64110 Tel: 816-926-4071 Cell: 816-726-8419 Fax: 816-926-2018 _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
