Hi - I double checked the browser and found the Affy array with some SNP data (in hg18). I didn't find it in any other tracks. hg19 has nothing.
What is interesting is that some tracks have a note that says "no chrM data" instead of the pull-down menu for display - and some don't - even when both sets have no chrM data. Would be nice to have this be consistent, especially for tracks that get a lot of use, like dbSNP. Thoughts? Am I missing any other SNP tracks with data? I double checked but could be wrong. Thanks, Jen ------------------------------------------------ Jennifer Jackson UCSC Genome Bioinformatics Group ----- "David Gordon" <[email protected]> wrote: > From: "David Gordon" <[email protected]> > To: [email protected] > Sent: Thursday, December 3, 2009 11:58:38 AM GMT -08:00 US/Canada Pacific > Subject: [Genome] mitochondrial snps > > Human mitochondria is known to contain many snps. However, the > Genome > Browser as well as the downloaded file snp130.txt show no > mitochondrial snps. Am I mistaken? Is there somewhere else on the > UCSC website where human mitochondrial snps may be downloaded? > > > Thanks in advance, > David Gordon > > > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
