Hello, For the test example, be sure to remove carriage returns in the leading track line (and the browser line, if you were using it). The track line should be one continuous string, space separated. A copy and paste can sometimes includes these and all whitespace looks the same when pasted into the window.
For your own example, add the word "track" to the very begining of the first line, then put a space, then the "type=bedGraph" attribute. Try these and let us know if you continue to have problems. Jennifer ------------------------------------------------ Jennifer Jackson UCSC Genome Bioinformatics Group ----- "Sunchiza Saric" <[email protected]> wrote: > From: "Sunchiza Saric" <[email protected]> > To: [email protected] > Sent: Monday, December 7, 2009 11:54:03 PM GMT -08:00 US/Canada Pacific > Subject: [Genome] bedGraph custom track > > Hi, I am trying to display the custom track in bedGraph format (in > hg18), and first I tried to copy-paste the example posted here: > http://genome.ucsc.edu/goldenPath/help/bedgraph.html > > It doesn't work, the error message says: "Unrecognized format > type=bedGraph line 10 of custom track". > > I get the same message (just with different line number, obviously) > when I try to display something simple, e.g: > type=bedGraph > chr1 2169906 2169935 3.08467659969677 > chr1 2169936 2169965 3.85908498054938 > chr1 2169966 2169995 4.1473555476725 > chr1 2332176 2332205 5.97493765118752 > chr1 2332206 2332235 6.08133962745194 > chr1 2332236 2332265 6.01609066089017 > chr1 2332266 2332295 5.86030236302431 > chr1 2332296 2332325 5.7890745177703 > chr1 2332326 2332355 5.7944236646806 > > > I tried both to upload the file and to copy-paste the text into the > box, I get the same error message. > > If you can tell me why this doesn't work, I would appreciate it (I am > quite sure it used to work some time ago). > > Thanks, > Sunchiza > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
