Hello, I am wondering if Blat is recommended for my situation. I am hoping to display backend sequences mapped against genomic sequences and to view the differences using SAM. What comparison tool would you recommend? I see as of yet samtools doesn't convert psl to sam but there is a low priority open task to do so. The task difficulty has been described as easy, so surely there's someone that has already performed this task?
Thanks, Bremen Braun _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
