Hello, We know of no known issues with this utility. If you would prefer to download a pre-compiled version (if this is appropriate for your system), the location to ftp from is here (use a direct ftp connection to the server hgdownload.cse.ucsc.edu, if possible - and at the ftp prompt type "bin" first, before the *get download):
Path to pre-compiled utilities: http://hgdownload.cse.ucsc.edu/admin/exe/ and use the link linux.x86_64/ to -> http://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/ Our apologies that your original question was not completely addressed earlier. If this occurs in the future, always feel free to send another question for an update. To ftp, the instructions in this FAQ are a good guide, although instead a cd into goldenPath/, you will cd into admin/ in the top level ftp directory. http://genome.ucsc.edu/FAQ/FAQdownloads#download1 Some other help links related to the correct methods to establish an environment for using the kent source tree: http://genomewiki.ucsc.edu/index.php/Category:Technical_FAQ http://genomewiki.ucsc.edu/index.php/The_source_tree (see src/utils) http://genomewiki.ucsc.edu/index.php/Kent_source_utilities If you need to still compile on your own and are having problems, please send the exact details of your system and an example of the type of errors that you are getting at the prompt (include the entire command thread). Be sure to start with the newest build release (v222 - https://lists.soe.ucsc.edu/pipermail/genome-mirror/2010-January/001544.html) and follow the instructions for a "clean" build found in the links above. Thank you, Jennifer ------------------------------------------------ Jennifer Jackson UCSC Genome Bioinformatics Group ----- "zhanglei" <[email protected]> wrote: > From: "zhanglei" <[email protected]> > To: [email protected] > Sent: Saturday, January 16, 2010 6:43:25 AM GMT -08:00 US/Canada Pacific > Subject: Re: [Genome] [BULK] problems with pslCDnaFilter > > HI: > > I want to know whether you have solved the problem about the > pslCDnaFilter. > > https://lists.soe.ucsc.edu/pipermail/genome/2009-August/019812.html > > Thank you. > > zhanglei > > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
