Hi,

I would like to use the blat program for blasting, but I could not use it.
Could you
please help me in running the program?

I downloaded "blatSuite.33x5.zip" for windows from "
http://genome-test.cse.ucsc.edu/~kent/exe/";. I unzipped the files. But when
I double click on the blat.exe or run the blat by using MS-DOS from command
line it gives an error as "This application has failed to start because
cygwin1.dll was not found".


I may overcome this problem by installing cygwin1.dll, but still I do not
know exactly how to run the blat. For example, how to tell the blat to blast
a sequence to all human chromosome? Could you please direct me how to use
blat locally on my computer, which has windows vista software. Or do you
have any kind manuel? I could not find on the USCS web site.

Sincerely,

mehmet.
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