Good Morning Kristian, Chuck: Please note the bigBed format: http://genome.ucsc.edu/goldenPath/help/bigBed.html
This will solve your problem. --Hiram Kristian Stevens wrote: > Hello, > > Please forward this to the appropriate people. > > We are in the midst of preparing a genome paper for 50+ Drosophila > melanogaster genomes sequenced using solexa technology. Our eventual hope is > that some of this could be > used as supplementary material for the paper, along with a custom population > genomics update to the ensembl browser we are collaborating with Ewan Birney > on (see links below). > > We have started a small number of sessions for viewing primary data and > derived statistics from this project. > For the most part we are happy with the interface, but are having some > problems uploading data. > > One of the data items we would really like to upload to our custom session is > the location of the mapped reads. Unfortunately we get a timeout when > uploading a whole genome. While uploading individual chromosomes has been > possible, it is too much data to do manually for all 300 chromosomes. > > These are currently in compressed BedGraph format, which is smaller than BAM. > Each genome is ~ 100M compressed. > > Do you have any advise on uploading this data into the browser? > > Thanks. > > Kristian Stevens and Chuck Langley > > http://www.dpgp.org/ > > http://metazoa.ensembl.org/Drosophila_melanogaster/Info/Index > > > > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome > _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
