Please note the power point slide lecture on this page: http://genomewiki.ucsc.edu/index.php/Presentations
for 05,07 Jan 2010 BME 230 Class One section (of the three sections) in this lecture demonstrates how to intersect with conservation scores. --Hiram Manisha Brahmachary wrote: > Hello, > > > > I have used the ensemble 3'UTR sequences (hg19) downloaded from UCSC, to do a > motif search exercise. Now I want to use the conservation scores for > alignments of 45 vertebrate genomes with Human (hg 19) on these motif > positions to see which of the motif sites are more significant in terms of > evolutionary conservation. Since I have used ENSEMBL sequences, can I still > use these conservation scores ie. will the positions of the UTR sequences > differ from the one used to derive the conservation scores? > > > > Thanks > > > > Manisha Brahmachary, Ph.D. > > Associate Research Scientist > > 1130 St Nicholas Avenue > > ICRC,Room 802,Columbia University > > New York, NY 10032 _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
