I couldn't find any reference to this in the archives: Im working on hg18, using the refGene table. There appears to be a difference between the table browser results ( http://genome.ucsc.edu/cgi-bin/hgTables) and the public mysql database ( genome-mysql.cse.ucsc.edu). Specifically, fetching all rows where name not like 'NR%' returns 30313 results from the table browser, and only 30269 from the public database. In addition, 44 results have different values, and a brief check by eye suggests they are mostly in the txStart column.
Any insight would be appreciated. Thanks Joshua Gagnon Dept of Biochemistry University of Otago _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
