Hi Geert, This error occurs when trying to run our utilities on an old version of gcc. In order use our 64-bit utilities you will need upgrade gcc to at least 4.1.2. Alternatively, you can download the source code and compile the utilities yourself.
I hope this information is helpful. Please feel free to contact the mail list again if you require further assistance. Best, Mary ------------------ Mary Goldman UCSC Bioinformatics Group On 5/25/10 1:22 AM, Geert Vandeweyer wrote: > Dear Jennifer, > > I also experience this problem. I recieve a "floating point exception" > when running the program without parameters. I have included some > specifications of the the server I'm running the script on: > > Downloaded (on 25/05/2010) liftOver from : > hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/ > <http://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/> > Also tried : bedToBigBed (same error) > System: > - uname -a : Linux 2.6.16.21-0.8-smp #1 SMP Mon Jul 3 18:25:39 UTC > 2006 x86_64 x86_64 x86_64 GNU/Linux > - /etc/SuSE-release: SUSE Linux Enterprise Server 10 (x86_64) > VERSION = 10 > - gcc -v : Using built-in specs. Target: x86_64-suse-linux > Configured with: ../configure --enable-threads=posix --prefix=/usr > --with-local-prefix=/usr/local --infodir=/usr/share/info > --mandir=/usr/share/man --libdir=/usr/lib64 --libexecdir=/usr/lib64 > --enable-languages=c,c++,objc,fortran,java,ada --enable-checking=release > --with-gxx-include-dir=/usr/include/c++/4.1.0 --enable-ssp > --disable-libssp --enable-java-awt=gtk --enable-gtk-cairo > --disable-libjava-multilib --with-slibdir=/lib64 --with-system-zlib > --enable-shared --enable-__cxa_atexit --enable-libstdcxx-allocator=new > --without-system-libunwind --with-cpu=generic --host=x86_64-suse-linux > Thread model: posix > gcc version 4.1.0 (SUSE Linux) > > > What I can do (but is hard to use in scripts): > - I have an Ubuntu Hardy Heron CHROOT installed on the system. Using > the same scripts inside this environment does work without a problem. > > > Best regards, > Geert > > > > > > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome > _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
