Hi Rachel,
On 8/4/10 10:58 AM, Rachel A. Soemedi wrote:
> hi Duke,
> i had the same problem.. and then i realized they are showed in
> alphabetical order!! so make your track name somehow in alphabetical
> order, and you can put whatever description name you want that will
> show on the browser.
Thanks for your response. I thought the same thing, but unfortunately
the tracks do not follow exactly alphabetcical order. I mentioned that I
named them so that they can be close to each other, but they are
actually not. For example:
IL6-uni-COV-BWA
<../cgi-bin/hgCustom?hgsid=507&hgct_table=ct_IL6uniCOVBWA_5667>
IL6-uni-COV-BWA bedGraph 4314855 chr1:
<../cgi-bin/hgTracks?hgsid=507&position=chr1:714000-714300&hgTracksConfigPage=notSet>
IL6-uni-COV-BT
<../cgi-bin/hgCustom?hgsid=507&hgct_table=ct_IL6uniCOVBT_2937>
IL6-uni-COV-BT bedGraph 5133628 chr1:
<../cgi-bin/hgTracks?hgsid=507&position=chr1:14400-14700&hgTracksConfigPage=notSet>
IL1b-uni-COV-BWA
<../cgi-bin/hgCustom?hgsid=507&hgct_table=ct_IL1buniCOVBWA_8520>
IL1b-uni-COV-BWA bedGraph 3558648 chr1:
<../cgi-bin/hgTracks?hgsid=507&position=chr1:714000-714300&hgTracksConfigPage=notSet>
IL1b-uni-COV-BT
<../cgi-bin/hgCustom?hgsid=507&hgct_table=ct_IL1buniCOVBT_7272>
IL1b-uni-COV-BT bedGraph 4274897 chr1:
<../cgi-bin/hgTracks?hgsid=507&position=chr1:15000-15300&hgTracksConfigPage=notSet>
IL61b-uni-COV-BWA
<../cgi-bin/hgCustom?hgsid=507&hgct_table=ct_IL61buniCOVBWA_6174>
IL61b-uni-COV-BWA bedGraph 5320584 chr1:
<../cgi-bin/hgTracks?hgsid=507&position=chr1:715500-715800&hgTracksConfigPage=notSet>
IL61b-uni-COV-BT
<../cgi-bin/hgCustom?hgsid=507&hgct_table=ct_IL61buniCOVBT_9658>
IL61b-uni-COV-BT bedGraph 6263206 chr1:
<../cgi-bin/hgTracks?hgsid=507&position=chr1:14700-15000&hgTracksConfigPage=notSet>
IL1b-uni-READS-BT
<../cgi-bin/hgCustom?hgsid=507&hgct_table=ct_IL1buniREADSBT_224>
IL1b-uni-READS-BT bam
IL1b-uni-READS-BWA
<../cgi-bin/hgCustom?hgsid=507&hgct_table=ct_IL1buniREADSBWA_5934>
IL1b-uni-READS-BWA bam
IL6-uni-READS-BT
<../cgi-bin/hgCustom?hgsid=507&hgct_table=ct_IL6uniREADSBT_1329>
IL6-uni-READS-BT bam
IL6-uni-READS-BWA
<../cgi-bin/hgCustom?hgsid=507&hgct_table=ct_IL6uniREADSBWA_3537>
IL6-uni-READS-BWA bam
IL61b-uni-READS-BT
<../cgi-bin/hgCustom?hgsid=507&hgct_table=ct_IL61buniREADSBT_8237>
IL61b-uni-READS-BT bam
IL61b-uni-READS-BWA
<../cgi-bin/hgCustom?hgsid=507&hgct_table=ct_IL61buniREADSBWA_1901>
IL61b-uni-READS-BWA ba
then the order of the tracks are:
IL1b-uni-COV-BT
<../cgi-bin/hgTrackUi?hgsid=507&c=chr1&g=ct_IL1buniCOVBT_7272>
IL1b-uni-COV-BWA
<../cgi-bin/hgTrackUi?hgsid=507&c=chr1&g=ct_IL1buniCOVBWA_8520>
IL1b-uni-READS-BT
<../cgi-bin/hgTrackUi?hgsid=507&c=chr1&g=ct_IL1buniREADSBT_224>
IL6-uni-COV-BT
<../cgi-bin/hgTrackUi?hgsid=507&c=chr1&g=ct_IL6uniCOVBT_2937>
IL6-uni-COV-BWA
<../cgi-bin/hgTrackUi?hgsid=507&c=chr1&g=ct_IL6uniCOVBWA_5667>
IL61b-uni-COV-BT
<../cgi-bin/hgTrackUi?hgsid=507&c=chr1&g=ct_IL61buniCOVBT_9658>
IL61b-uni-COV-BWA
<../cgi-bin/hgTrackUi?hgsid=507&c=chr1&g=ct_IL61buniCOVBWA_6174>
IL1b-uni-READS-BWA
<../cgi-bin/hgTrackUi?hgsid=507&c=chr1&g=ct_IL1buniREADSBWA_5934>
IL6-uni-READS-BT
<../cgi-bin/hgTrackUi?hgsid=507&c=chr1&g=ct_IL6uniREADSBT_1329>
IL6-uni-READS-BWA
<../cgi-bin/hgTrackUi?hgsid=507&c=chr1&g=ct_IL6uniREADSBWA_3537>
IL61b-uni-READS-BT
<../cgi-bin/hgTrackUi?hgsid=507&c=chr1&g=ct_IL61buniREADSBT_8237>
IL61b-uni-READS-BWA
<../cgi-bin/hgTrackUi?hgsid=507&c=chr1&g=ct_IL61buniREADSBWA_1901>
As you can see, IL1b-uni-READS-BWA should be next to IL1b-uni group, but
it is not!
Any other experience/suggestion?
Thanks,
D.
>
> r
>
> On Wed, Aug 4, 2010 at 3:53 PM, Duke <[email protected]
> <mailto:[email protected]>> wrote:
>
> Hi all,
>
> I upload several tracks (in different lanes of a run) to UCSC mirror,
> but the way they are shown are weird as they do not follow any order
> despite the fact that I named them so that the tracks with very
> similar
> name should be close to each other, for example: track1-uni-READ and
> track1-uni-COV. Unfortunately in the Manage Custom Track, I do not see
> any feature to move a track up or down. This is quite annoying.
>
> I might have missed something, but anybody can suggest me how to
> rearrange the tracks so that they can display as I want (for example,
> move one track close to another track)?
>
> Thanks,
>
> D.
> _______________________________________________
> Genome maillist - [email protected]
> <mailto:[email protected]>
> https://lists.soe.ucsc.edu/mailman/listinfo/genome
>
>
_______________________________________________
Genome maillist - [email protected]
https://lists.soe.ucsc.edu/mailman/listinfo/genome
