Hi Hiram, On 8/4/10 11:21 AM, Hiram Clawson wrote: > You can control the order of your tracks at the time of submission > by placing a priority=N variable on your track line. > > After they are loaded, go to the "configure" page and turn on > the option to "reorder tracks" and adjust their priorities there.
Thanks so much! I did not know this feature before. Anyway, I just went directly to Congifure, enabled Re-order tracks and it works (without using priority=N). So what does priority=N do? Thanks, D. > --Hiram > > ----- Original Message ----- > From: "Duke"<[email protected]> > To: "ra soemedi"<[email protected]> > Cc: [email protected] > Sent: Wednesday, August 4, 2010 8:16:43 AM GMT -08:00 US/Canada Pacific > Subject: Re: [Genome] rearrange tracks in a custom track > > Hi Rachel, > > On 8/4/10 10:58 AM, Rachel A. Soemedi wrote: >> hi Duke, >> i had the same problem.. and then i realized they are showed in >> alphabetical order!! so make your track name somehow in alphabetical >> order, and you can put whatever description name you want that will >> show on the browser. > Thanks for your response. I thought the same thing, but unfortunately > the tracks do not follow exactly alphabetcical order. I mentioned that I > named them so that they can be close to each other, but they are > actually not. For example: > > IL6-uni-COV-BWA > <../cgi-bin/hgCustom?hgsid=507&hgct_table=ct_IL6uniCOVBWA_5667> > IL6-uni-COV-BWA bedGraph 4314855 chr1: > <../cgi-bin/hgTracks?hgsid=507&position=chr1:714000-714300&hgTracksConfigPage=notSet> > > IL6-uni-COV-BT > <../cgi-bin/hgCustom?hgsid=507&hgct_table=ct_IL6uniCOVBT_2937> > IL6-uni-COV-BT bedGraph 5133628 chr1: > <../cgi-bin/hgTracks?hgsid=507&position=chr1:14400-14700&hgTracksConfigPage=notSet> > > IL1b-uni-COV-BWA > <../cgi-bin/hgCustom?hgsid=507&hgct_table=ct_IL1buniCOVBWA_8520> > IL1b-uni-COV-BWA bedGraph 3558648 chr1: > <../cgi-bin/hgTracks?hgsid=507&position=chr1:714000-714300&hgTracksConfigPage=notSet> > > IL1b-uni-COV-BT > <../cgi-bin/hgCustom?hgsid=507&hgct_table=ct_IL1buniCOVBT_7272> > IL1b-uni-COV-BT bedGraph 4274897 chr1: > <../cgi-bin/hgTracks?hgsid=507&position=chr1:15000-15300&hgTracksConfigPage=notSet> > > IL61b-uni-COV-BWA > <../cgi-bin/hgCustom?hgsid=507&hgct_table=ct_IL61buniCOVBWA_6174> > IL61b-uni-COV-BWA bedGraph 5320584 chr1: > <../cgi-bin/hgTracks?hgsid=507&position=chr1:715500-715800&hgTracksConfigPage=notSet> > > IL61b-uni-COV-BT > <../cgi-bin/hgCustom?hgsid=507&hgct_table=ct_IL61buniCOVBT_9658> > IL61b-uni-COV-BT bedGraph 6263206 chr1: > <../cgi-bin/hgTracks?hgsid=507&position=chr1:14700-15000&hgTracksConfigPage=notSet> > > IL1b-uni-READS-BT > <../cgi-bin/hgCustom?hgsid=507&hgct_table=ct_IL1buniREADSBT_224> > IL1b-uni-READS-BT bam > IL1b-uni-READS-BWA > <../cgi-bin/hgCustom?hgsid=507&hgct_table=ct_IL1buniREADSBWA_5934> > IL1b-uni-READS-BWA bam > IL6-uni-READS-BT > <../cgi-bin/hgCustom?hgsid=507&hgct_table=ct_IL6uniREADSBT_1329> > IL6-uni-READS-BT bam > IL6-uni-READS-BWA > <../cgi-bin/hgCustom?hgsid=507&hgct_table=ct_IL6uniREADSBWA_3537> > IL6-uni-READS-BWA bam > IL61b-uni-READS-BT > <../cgi-bin/hgCustom?hgsid=507&hgct_table=ct_IL61buniREADSBT_8237> > IL61b-uni-READS-BT bam > IL61b-uni-READS-BWA > <../cgi-bin/hgCustom?hgsid=507&hgct_table=ct_IL61buniREADSBWA_1901> > IL61b-uni-READS-BWA ba > > > > then the order of the tracks are: > > IL1b-uni-COV-BT > <../cgi-bin/hgTrackUi?hgsid=507&c=chr1&g=ct_IL1buniCOVBT_7272> > IL1b-uni-COV-BWA > <../cgi-bin/hgTrackUi?hgsid=507&c=chr1&g=ct_IL1buniCOVBWA_8520> > IL1b-uni-READS-BT > <../cgi-bin/hgTrackUi?hgsid=507&c=chr1&g=ct_IL1buniREADSBT_224> > IL6-uni-COV-BT > <../cgi-bin/hgTrackUi?hgsid=507&c=chr1&g=ct_IL6uniCOVBT_2937> > IL6-uni-COV-BWA > <../cgi-bin/hgTrackUi?hgsid=507&c=chr1&g=ct_IL6uniCOVBWA_5667> > IL61b-uni-COV-BT > <../cgi-bin/hgTrackUi?hgsid=507&c=chr1&g=ct_IL61buniCOVBT_9658> > IL61b-uni-COV-BWA > <../cgi-bin/hgTrackUi?hgsid=507&c=chr1&g=ct_IL61buniCOVBWA_6174> > IL1b-uni-READS-BWA > <../cgi-bin/hgTrackUi?hgsid=507&c=chr1&g=ct_IL1buniREADSBWA_5934> > IL6-uni-READS-BT > <../cgi-bin/hgTrackUi?hgsid=507&c=chr1&g=ct_IL6uniREADSBT_1329> > IL6-uni-READS-BWA > <../cgi-bin/hgTrackUi?hgsid=507&c=chr1&g=ct_IL6uniREADSBWA_3537> > IL61b-uni-READS-BT > <../cgi-bin/hgTrackUi?hgsid=507&c=chr1&g=ct_IL61buniREADSBT_8237> > IL61b-uni-READS-BWA > <../cgi-bin/hgTrackUi?hgsid=507&c=chr1&g=ct_IL61buniREADSBWA_1901> > > > > As you can see, IL1b-uni-READS-BWA should be next to IL1b-uni group, but > it is not! > > Any other experience/suggestion? > > Thanks, > > D. > >> r >> >> On Wed, Aug 4, 2010 at 3:53 PM, Duke<[email protected] >> <mailto:[email protected]>> wrote: >> >> Hi all, >> >> I upload several tracks (in different lanes of a run) to UCSC mirror, >> but the way they are shown are weird as they do not follow any order >> despite the fact that I named them so that the tracks with very >> similar >> name should be close to each other, for example: track1-uni-READ and >> track1-uni-COV. Unfortunately in the Manage Custom Track, I do not see >> any feature to move a track up or down. This is quite annoying. >> >> I might have missed something, but anybody can suggest me how to >> rearrange the tracks so that they can display as I want (for example, >> move one track close to another track)? >> >> Thanks, >> >> D. >> _______________________________________________ >> Genome maillist - [email protected] >> <mailto:[email protected]> >> https://lists.soe.ucsc.edu/mailman/listinfo/genome >> >> > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome > _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
