Try it on a larger machine, and make sure you're runing a version compiled with 64 bit.
You are pushing the envelope here Greg. _Why_ do you need to have less of the 3' end match perfectly? Are you amplifying non-human DNA with human primers? On Aug 4, 2010, at 10:19 AM, Gregory Dougherty wrote: > On a server w/ 8 GB of RAM I tried running gfServer with a stepSize of 1, > tileSize of 11, on hg18. I got a Segmentation Fault. Running it with > stepSize of 2 works, and on a 4GB machine the stepSize of 2 generates a "not > enough memory" error rather than a segfault. > > Is this a known problem? The machine is x86_64, running Linux. > > TIA, > > Greg > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
