Hi Danny, It is possible to set all subtracks of a composite at once, but, unfortunately, it is not possible to set the graph configurations of multiple tracks at the same time.
Katrina Muehlschlegel, Jochen D.,M.D. wrote, On 08/27/10 10:38: > Thanks Katrina, that works. > > Any way to do it for all samples at once ? I have 12 tracks. > > Danny > > > > -----Original Message----- > From: Katrina Learned [mailto:[email protected]] > Sent: Friday, August 27, 2010 12:55 PM > To: Vanessa Kirkup Swing > Cc: Muehlschlegel, Jochen D.,M.D.; [email protected] > Subject: Re: [Genome] FW: Genome browser scale > > Hi Jochen, > > I just wanted to follow-up the email my colleague sent with some > additional information. At this point, auto-scale can only take into > account a single dataset. However, you can manually configure the graphs > to display the same y-axis scale. To set all datasets within a composite > track to the same y-scale, you can click on the name of the View you are > using (ex. Raw Signals) and the graph configuration controls should > appear. From here, under "Data view scaling," you can select "use > vertical viewing range setting" and set the min and max of the Vertical > viewing range to whatever you like. If you are comparing datasets in > different composites, set the vertical viewing range the same in both > composites. For more information on the graph configurations, see this > page: http://genome.ucsc.edu/goldenPath/help/hgWiggleTrackHelp.html > > Please don't hesitate to contact the mail list again if you have any > further questions. > > Katrina Learned > UCSC Genome Bioinformatics Group > > Vanessa Kirkup Swing wrote, On 08/26/10 14:55: > >> Dear Jochen, >> >> Unfortunately, the browser currently doesn't have this feature. Your >> > suggestion will be forwarded to our management team for consideration. > >> If you require further assistance, please don't hesitate to contact the >> > mailing list. > >> Vanessa Kirkup Swing >> UCSC Genome Bioinformatics Group >> >> ----- Original Message ----- >> From: "Jochen D. Muehlschlegel,M.D." <[email protected]> >> To: [email protected] >> Sent: Thursday, August 26, 2010 12:46:58 PM GMT -08:00 US/Canada Pacific >> Subject: [Genome] FW: Genome browser scale >> >> Hi, >> >> when comparing two gene expression datasets in the genome browser, the y-axis >> scale defaults to the maximum to display an individual tract appropriately. >> > The > >> number then displayed on the left is nice to know the maximum expression, but >> > it > >> makes it hard to compare two samples accross many exons. Is it possible to >> manipulate the y-axis scale to have it the same for all samples ? >> >> Thanks, >> >> Danny >> >> >> >> The information in this e-mail is intended only for the person to whom it is >> addressed. If you believe this e-mail was sent to you in error and the e-mail >> contains patient information, please contact the Partners Compliance HelpLine >> > at > >> http://www.partners.org/complianceline . If the e-mail was sent to you in >> > error > >> but does not contain patient information, please contact the sender and >> > properly > >> dispose of the e-mail. >> _______________________________________________ >> Genome maillist - [email protected] >> https://lists.soe.ucsc.edu/mailman/listinfo/genome >> _______________________________________________ >> Genome maillist - [email protected] >> https://lists.soe.ucsc.edu/mailman/listinfo/genome >> >> _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
