Hi Nikhat, when you run blat you can simply add the option -out=blast8 and you would get your output in blast tabular format. Shruti
On Wed, May 27, 2009 at 9:17 AM, Nikhat Zafar <[email protected]> wrote: > Hi , > > I'm trying to find the blat version that supports output in NCBI blast > tabular format. I got the latest version of blat from here > http://genome-test.cse.ucsc.edu/~kent/exe/linux/<http://genome-test.cse.ucsc.edu/%7Ekent/exe/linux/>, > but when I ran help on > it it only supports out in psl ans pslx format. Any help will be greatly > appreciated. > > > Nikhat > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome > -- Shruti Bhide Graduate Student MS Bioinformatics School of Biology Georgia Institute of Technology _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
