Hi,
i think this problem might be discussed for many times and i do find som
search results for that
one mail i searched is of Jim which contains:
////
Hmm. You could just use the -out=blast option if you
really want a drop-in replacement. Otherwise try
percentId = 100.0 * (match + repMatch) /
(misMatch + match + repMatch + qNumInsert + tNumInsert)
/////
i had try that formula,find the result output by command line blat still
different with webblat...
can anyone give another calc method? or something of mine wrong?
Best Wishes.
--
Daofeng Li,PhD Candidate
China Agricultural University
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