I have a basic question, but It is preventing me from getting any work done!

When running blat in the command line, where do I get the database and query
from?

I want to align a file that I have named sva.fa.  I am,not exactly sure what
is meant by query and database, and where I should get them from.

Your help is greatly appreciated.

If possible, can you give me a step by step  of how to use BLAT after it is
successfully downloaded?

-- 
Lita Mallett
USC'12 Biomedical Engineering, BS
Anointed Vessels of Praise | President
Saved By Grace Gospel Choir | Secretary
Black Student Assembly | Administrative Assistant
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