Hi Kawaji,
It looks like you have found a bug in our script. Thank you for bringing
this to our attention. Please contact us again at [email protected] if
you have any further questions.
---
Luvina Guruvadoo
UCSC Genome Bioinformatics Group
On 7/7/2011 5:23 PM, KAWAJI Hideya wrote:
> Dear the developers,
>
> I found bigWigMerge included in the source tree is very useful, but
> found different outputs depending on the order of files, which is not
> expected from its description ("bigWigMerge - Merge together multiple
> bigWigs into a single output bedGraph").
>
> $ bigWigToBedGraph t1.bw /dev/stdout
> chr1 10000 10001 1
> chr2 20000 20001 1
>
> $ bigWigToBedGraph t2.bw /dev/stdout
> chr1 1000 20001 1
>
> $ bigWigMerge t1.bw t2.bw /dev/stdout
> chr1 1000 10000 1
> chr1 10000 10001 2
> chr1 10001 20001 1
> chr2 20000 20001 1
>
> # this is the expected result
>
> $ bigWigMerge t2.bw t1.bw /dev/stdout
> chr1 10000 10001 2
> chr1 10001 20001 1
>
> # two lines disappeared
>
>
>
> best wishes,
> Kawaji H.
> _______________________________________________
> Genome maillist - [email protected]
> https://lists.soe.ucsc.edu/mailman/listinfo/genome
>
_______________________________________________
Genome maillist - [email protected]
https://lists.soe.ucsc.edu/mailman/listinfo/genome
