Hi Yishay, The "RefSeq Genes" track in the "Genes and Gene Prediction Tracks" shows RefSeq Genes aligned to the genome using BLAT. To get the coordinates for a single RefSeq Gene, enter the identifier in the position/search box. Note that only RefSeq identifiers that begin with "NM_" or "NR_" are included in the Genome Browser.
To get genomic coordinates for many RefSeq Genes, you can use the Table Browser, or you can download the entire RefSeq Genes table from our downloads server by going to our home page and clicking: Downloads -> (click on an organism) -> Annotation database -> refGene.txt.gz. I hope this is helpful. If you have further questions, please contact us again at [email protected]. -- Brooke Rhead UCSC Genome Bioinformatics Group On 10/6/11 1:48 AM, yishay pinto wrote: > Hi, > Is there any way to convert a refseq coordinate (by refseq Id and location) > to a genomic location? > thanks > Yishay > > 2011/9/8 yishay pinto<[email protected]> > >> hello, >> I'm about to do a genomic project. >> I would like to consult about the strategy I should take in order to work >> with your databases properly. In addition i would be glad to know and if >> there any tools or interface that I better use. >> However am I in the right place to ask this questions? >> > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
