Hi Alban, UCSC does not currently host SK1, and unfortunately, we cannot provide liftOver files between species we do not display in the browser.
Please contact us again at [email protected] if you have any further questions. --- Luvina Guruvadoo UCSC Genome Bioinformatics Group On 10/18/2011 9:32 AM, Alban Lermine wrote: > Hi, > > I would like to convert coordinates from one Yeast Genome (SK1) to > another (S288C). > In order to do this, I will use the liftOver tool provided on your web site. > > But I can't found the over.chain file to run liftOver. > > Can you generate this file for me? > > Here are the 2 genomes: > > S288C: > http://xfer.curie.fr/get/Lr1bdX5y7P1/S288C_reference_sequence_R64-1-1_20110203.validated.fasta > > SK1: http://xfer.curie.fr/get/Bzh3ti8HL6f/SK1_sequence_21022008.validated.fa > > My request is to convert SK1 coordinates into S288C coordinates. > > Thanks by advance, > > Best regards, > > Alban > _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
