You are losing me. What is chromosome N ? I've never heard of chromosome N How long is it ?
--Hiram Chhogalal, Shravan (Cognizant) wrote: > Hi Hiram, > > In the file danRer7.fa.gz, we have chromosome sequences for each > chromosome. > > Example: > >> chr1 > TTCTTCTGGGGAAAGTCTGATTTGATTTATTTCCCTTttaagatcaatat > tattagccccatgtgttgaagaacaaatctctctgttaaacagaaattgg > gggggaaaataaacaggggggcaaataattctgactacaattgtatatat > > >> chr2 > ACACACTGATCCAGACAGTCTTTACTCTGCAATAATCCAGCAGTAGTCgt > gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtCGTC > TCCTCGGGTCAGGCATCGGTGAGCTGCTCGCTTGCTCTGGTCCTCCTCTT > >> chr18 > AGAACTGGGTTCCCGCCAGTAAACAGGCCGTTACGGTCTCCTACTTCTAC > GACAGCGCACGCAACAGCTACCGCATCATCAGCGTAGACGGAACAAAGGT > CAGACAGATACATGTGTACCTGTACGTGTGTGTGATAGAGTCAGAGTTAG > >> chrM > ACGGCCGGCGACAATTTATATGTCAATGTTTTAGTAATTTACAATTAAGA > CAGACATGCACTGTATTGATACATTAATCATACATAAAATGCATGCTCTA > ATTTTTACATATGCATGTGCAAGCATATACATATGTGTGGATACACACGT > > Similarly there is no sequence for chromosome N (chrN). > > > Thanks, Shravan > Cognizant Support Analyst - Bio-Target | W: +91 44 3921 6565 | M: +91 > (0) 98408 09224| > > > -----Original Message----- > From: Hiram Clawson [mailto:[email protected]] > Sent: 09 November 2011 17:14 > To: Chhogalal, Shravan (Cognizant) > Cc: [email protected]; Kaliyamoorthi, Anjugam (Cognizant); Muthusamy, > Murugesan (Cognizant) > Subject: Re: [Genome] danRer7 for ZebraFish Zv9 Release > > Can you please clarify, what is chromosome N ? > > --Hiram > > Chhogalal, Shravan (Cognizant) wrote: >> Hi Team, >> >> In the file downloaded from the location >> ftp://hgdownload.cse.ucsc.edu/goldenPath/danRer7/bigZips/danRer7.fa.gz >> >> We do not have any data for chromosome N, can you please let us know > the >> reason why no data is available for chromosome N. >> >> Or is there no data for chromosome N for Zebrafish >> >> Thanks, Shravan >> Cognizant Support Analyst - Bio-Target | W: +91 44 3921 6565 | M: +91 >> (0) 98408 09224| > _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
