Hi Tom, Thank you for bringing this issue with the fonts in the tree drawing utility to our attention. We have added the request our tracking system. I don't have any time frame yet on when this might be implemented.
-- Brooke Rhead UCSC Genome Bioinformatics Group On 12/2/11 9:41 AM, thomas pringle wrote: > hi folks, > > the current tree-drawing utility is quite good, about the best one > left the web. trees are becoming increasingly more important as more > genomes come in. http://genome-test.cse.ucsc.edu/cgi-bin/phyloGif > > it desparately needs an option to display in monospaced font (menlo > better than courier/anadale/monaco?) rather than than font it is > doing now. > > the reason for this is as follows: users need to put in much more > text and data into the tree and have it align character by character. > a simple example where the tree topology needs to be retained so > visitor can interpret the data properly: ie the T threonine in > gorilla and orang was ancestral for a while, whereas F phenylalanine > in rhesus and baboon just affected old world monkeys. > > > > tree drawing files... (((((homSap,panTro), gorGor), ponAbe),(macMul, > papAnu)), (calJac, saiBol)); > > ((((((homSap_LSRELKEPP_Homo_sapiens__human,panTro_........._Pan_troglodytes__chimp > >), gorGor_.T......._Gorilla_gorilla__gorilla > ), ponAbe_.T......._Pongo_abelii__orangutan > ),nomLeu_........._Nomascus_leucogenys__gibbon > ),(macMul_....F...._Macaca_mulatta__rhesus , > papAnu_....F...._Papio_anubis__baboon )), > (_Callithrix_jacchus__marmoset, > saiBol_..K....L._Saimiri_boliviensis_squirrel_monkey)); > > thanks! tom _______________________________________________ Genome > maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
