> > Program received signal SIGSEGV, Segmentation fault. > 0x00002aaaab15a88c in __find_specmb () from /lib64/tls/libc.so.6 > (gdb) where > #0 0x00002aaaab15a88c in __find_specmb () from /lib64/tls/libc.so.6 > #1 0x00002aaaab140e6f in vfprintf () from /lib64/tls/libc.so.6 > #2 0x00002aaaab15e2a9 in vsprintf () from /lib64/tls/libc.so.6 > #3 0x00002aaaab149568 in sprintf () from /lib64/tls/libc.so.6 > #4 0x000000000040248b in mknb_code (format=0x40cd2e "s") at > mknb_metacode.c:282
This says that there's a call to sprintf() at mknb_metacode.c line 282. Just before that call check all the parameters that will be passed to sprintf. You can do that in the debugger, but you might find it easier to just put a bunch of printf's in at that point. Looks like there's a a bad pointer in there somewhere. Once you figure out which variable is bogus trace back up through the following code with the debugger (or more printf's) > #5 0x0000000000401aaf in mknb_declare_real (name=0x7fffffffd0d0 > "ix1,iy1,iz1,fix1,fiy1,fiz1") at mknb_metacode.c:104 > #6 0x0000000000403e62 in mknb_declare_variables () at > mknb_declarations.c:258 > #7 0x0000000000400fef in mknb_write_function () at mknb.c:154 > #8 0x00000000004017cf in main (argc=1, argv=0x7fffffffd628) at mknb.c:348 until you find out where things have gone wrong. Regards, David Mathog [EMAIL PROTECTED] Manager, Sequence Analysis Facility, Biology Division, Caltech _______________________________________________ gmx-users mailing list gmx-users@gromacs.org http://www.gromacs.org/mailman/listinfo/gmx-users Please don't post (un)subscribe requests to the list. Use the www interface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php
