Vladimir, The default "--prefix" is /usr/local. You're not allowed to write there as user, that's why that failed. So it did succeed as root; root is allowed to write there. I suggest installing as user, with ./configure --prefix=/home/vladimir/gmx331 and whatever other options you need. Check ./configure --help
Cheers, Tsjerk On 1/16/07, Vladimir Korostelev <[EMAIL PROTECTED]> wrote:
* Mark Abraham <[EMAIL PROTECTED]> [Tue, 16 Jan 2007 20:43:56 +1100]: > Until you know what you're doing, I suggest following the installation > instructions on the gromacs web page precisely. > I think I did! it was done in 3 simple steps: $./configure $make $make install after installation of fftw. > > There were no error messages during installation but when it was done > I > > typed: > > > > $./luck > > Well that will work only if there is a l"luck" program in the current > directory. I bet there wasn't :-) yes, there is no luck only GROMACS in winter. ;) > > I had logged in as a root and installed into my user directory > > /home/vladimir > > fftw2.15, then I had installed gromacs3.3.1 into > > /home/vladimir/gromacs-3.3.1 > > However I cannot find where is bin subdirectory? it's not in > > /home/vladimir/gromacs-3.3.1, > > What is the point of logging in as root to install things in your user > space? I did this after installation by user had failed - there were messages: Permission denied during compilation. But installation into user space after logging in as a root went without errors. So I think it should be installed. Where a bin subdirectory should be? Cheers Vladimir -- Рамблер поздравляет с Новым годом! http://www.2007.rambler.ru/ _______________________________________________ gmx-users mailing list gmx-users@gromacs.org http://www.gromacs.org/mailman/listinfo/gmx-users Please don't post (un)subscribe requests to the list. Use the www interface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php
-- Tsjerk A. Wassenaar, Ph.D. Junior UD (post-doc) Biomolecular NMR, Bijvoet Center Utrecht University Padualaan 8 3584 CH Utrecht The Netherlands P: +31-30-2539931 F: +31-30-2537623
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