Hi,
I finished a simulation of a carbon nanotube in water. I made a movie of the simulation using 'trjconv' to view with Pymol. The problem is that starting from the third frame it messes the carbon nanotube bonds. I changed the start time and again in the third frames it messed things up. I output each frame in a different file using the '-sep' option and it could read each one successfuly, so I think the problem is in reading them in sequence. Can anyone help with that?
   Thank you very much,
Regards,
George
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