Sheyore Omovie wrote:
I am doing an Energy Minimisation run for two polypeptides in a box. I get the range checking error, variable ci= .... and the simulation crashes. After changing ns_type to simple, the simulation is running, but very slowly and the first few steps return Epot=nan.
What could I have done wrong?
coordinates on top of each other
topology


Rgds
John

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David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
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