> hi, all > My protein has 16 subunits. After I use trjconv '-pbc nojump' to remove > the jump in the whole protein, there are no jump to each subunits. > However, when i check pdb file of the first frame, it is shown that the > subunits are not in right position. The area of interface between some > subunits is zero, but it should not be. Could you give me some > suggestions how to solve this problem?
Try some of the other options to trjconv. Mark _______________________________________________ gmx-users mailing list gmx-users@gromacs.org http://www.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php
