ABEL Stephane 175950 wrote:
I am back :(

The procedure i did

1) do_dssp -s test-Struc.pdb -f test-Struc.pdb -dt 1 -o ss.xpm
The menu appears I choose 5 (Main Chain) and I obtained the following message

The ddsGGvys is indeed a pdb file with the protein atoms (main chain). But the program seems to run because the prompt did not appear but the ouput ss.xpm is never present.
What is the problem ?

http://wiki.gromacs.org/index.php/do_dssp

Mark
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