Are you using united atom lipids? If so, you may want to reconsider
attempting this. If not, you'll be more likely to get further
assistance if you provide quite a bit more information and demonstrate
that you invested some time trying to solve this.
-- original message --
Yes, I looked into that. But could not find any information about how to
include new acceptor or donor atoms. Could you please be more specific ?
Thank you !
On Thu, Apr 17, 2008 at 12:34 PM, Justin A. Lemkul <[EMAIL PROTECTED]> wrote:
[Hide Quoted Text]
Quoting maria goranovic <[EMAIL PROTECTED]>:
Dear All,
Where are the donor and acceptor atoms defined for the g_hbond analysis
? I
was trying to calculate h-bonds between a peptide and a popc bilayer,
but
there are no acceptor or donors listed for POPC. How can one change this
?
Have a look at g_hbond -h
-Justin
Sincerely,
-Maria
--
Maria G.
Technical University of Denmark
Copenhagen
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