On Mon, 2009-07-06 at 11:18 +0100, Adam Huffman wrote: > I have an odd problem running the Gromacs 4.0.4 RPM installable as part > of Fedora 10. On two machines, it runs fine. On a third, each program > I invoke dies as a result of the buffer overflow detector in glibc. > Here's some example output:
> The same thing happens if I recompile the SRPM myself and install that. > > Any clues as to how to track this down would be greatly appreciated. Install the debuginfo with # debuginfo-install gromacs and run gromacs with gdb: $ gdb g_mdrun (gdb) run -s topol.tpr (and so on.) Gdb might tell you to install the debuginfo of other packages too. I have been working on getting also debug binaries in the package, but I won't push the new package until 4.0.6 is released which fixes the build error on ppc64 architecture. -- ------------------------------------------------------ Jussi Lehtola, FM, Tohtorikoulutettava Fysiikan laitos, Helsingin Yliopisto jussi.leht...@helsinki.fi, p. 191 50632 ------------------------------------------------------ Mr. Jussi Lehtola, M. Sc., Doctoral Student Department of Physics, University of Helsinki, Finland jussi.leht...@helsinki.fi ------------------------------------------------------ _______________________________________________ gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/mailing_lists/users.php
