Hello, I am trying to use g_order (gmx 4.0.5) on a coarse grained membrane. Because the distances between two atoms two bonds apart is greater than 0.3nm I keep receiving the message:
..................................... Warming: distance between atoms ***** and XXXXX > 0.3 nm (******) . Index file might be corrupt Warming: distance between atoms ***** and XXXXX > 0.3 nm (******) . Index file might be corrupt Warming: distance between atoms ***** and XXXXX > 0.3 nm (******) . Index file might be corrupt Warming: distance between atoms ***** and XXXXX > 0.3 nm (******) . Index file might be corrupt Warming: distance between atoms ***** and XXXXX > 0.3 nm (******) . Index file might be corrupt ..................... and so on I think that writing out these messages reduces the performance of the g_order which takes a lot of time to complete. Does anyone know how to suppress these messages? Thank you, Andrei _______________________________________________ gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/mailing_lists/users.php
