On 11/01/2012 10:07 PM, Anik Sen wrote:
I have already done that but the problem persisits.
Get a clean tarball of FFTW3 and follow
http://www.gromacs.org/Downloads/Installation_Instructions#Details_for_building_the_FFTW_prerequisite.
Probably you have a mess of previous configure commands, or didn't
actually install the --enable-shared binaries.
Mark
------------------------------------------------------------------------
*From:* gmx-users-boun...@gromacs.org [gmx-users-boun...@gromacs.org]
on behalf of Javier Cerezo [j...@um.es]
*Sent:* Wednesday, January 11, 2012 1:56 PM
*To:* gmx-users@gromacs.org
*Subject:* Re: [gmx-users] (no subject)
Hi
You should compile your fftw with --enable-shared if you want to link
your gromacs installation to shared libraries (which is the default in
the latest versions). Check the installation instructions in the website.
Javier
El 11/01/12 08:20, Anik Sen escribió:
Im having problems installing Gromacs. I followed the GROMACS
installation instructions as suggested by justin. But in vain. The
same error is coming again and again. Please suggest.
The error file is given below:
*/usr/bin/ld: /usr/local/lib/libfftw3.a(plan-dft-r2c-3d.o):
relocation R_X86_64_32 against `a local symbol' can not be used when
making a shared object; recompile with -fPIC*
*/usr/local/lib/libfftw3.a: could not read symbols: Bad value*
*collect2: ld returned 1 exit status*
*make[3]: *** [libmd_d.la <http://libmd_d.la/>] Error 1*
*make[3]: Leaving directory
`/home/ganguly/Gromacs/gromacs-4.5.5/src/mdlib'*
*make[2]: *** [all-recursive] Error 1*
*make[2]: Leaving directory `/home/ganguly/Gromacs/gromacs-4.5.5/src'*
*make[1]: *** [all] Error 2*
*make[1]: Leaving directory `/home/ganguly/Gromacs/gromacs-4.5.5/src'*
*make: *** [all-recursive] Error 1*
Thanx in advance
Anik
========================================================
Anik Sen
Student
CSIR-Central Salt & Marine Chemicals Research Institute,
Gijubhai Badheka Marg.
Bhavnagar, Gujarat 364002
www.csmcri.org
========================================================
--
Javier CEREZO BASTIDA
PhD Student
Physical Chemistry
Universidad de Murcia
Murcia (Spain)
Phone: (+34)868887434
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