Why do you think this is a problem? This isn't exactly a crystal or a fluid... Besides, you know everything about the system down to the LJ parameters. Why not do an analytical estimate?

On 8/5/2015 11:17 PM, Sunil Ghimire wrote:
I simulated the mixture of argon and krypton(400 atoms).After equilibration
run with NPT ensemble at temperature 300k and pressure 1 bar with
compressibility 1 bar-1, I obtained required density and pressure but the
potential energy was negative and total energy was positive.Is it (positive
total energy ) matters or not?
   Best regards,
Ghimire sunil

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