On 8/20/15 8:42 AM, 岡部篤俊 wrote:
Thanks, Peter.
But , I mean I don’t know what line I should change to from line 52 of
cmake/FindPhinx.cmake to solve this error.
Mark's message provided the corrected line. Just replace whatever is on line 52
with that.
-Justin
Leucer
2015/08/20 16:02、Kroon, P.C. <p.c.kr...@rug.nl> のメール:
Just use your favourite text editor.
Peter
On Thu, Aug 20, 2015 at 3:10 AM, <atsutoshi0...@gmail.com> wrote:
Line 52 of cmake/FindSphinx.cmake file is written below.
string(REGEX REPLACE "Sphinx \\([^)]*\\) ([^ ]+)" "\\1"
SPHINX_EXECUTABLE_VERSION "${SPHINX_VERSION_OUTPUT_VARIABLE}")
Can you tell me how I can change the line?
Bests,
Leucer
2015/08/19 23:11、Mark Abraham <mark.j.abra...@gmail.com> のメッセージ:
Hi,
On Wed, Aug 19, 2015 at 3:49 PM 岡部篤俊 <atsutoshi0...@gmail.com> wrote:
Hi,
I am unable to compile Gromamcs 5.1 using the following cmake command.
cmake .. -DGMX_FFT_LIBRARY=fftpack
-DCMAKE_INSTALL_PREFIX=gromacs/gromacs-5.1 -DGMX_DOUBLE=off
-DGMX_THREAD_MPI=off -DGMX_MPI=on -DGMX_CPU_ACCELERATION=SSE4.1
Unrelated, but you now need to use -DGMX_SIMD=SSE4.1 to have the same
effect.
-DGMX_USE_RDTSCP=off
Then I got the error message.
Boost >= 1.44 not found. Using minimal internal version. This may cause
trouble if you plan on compiling/linking other software that uses Boost
against GROMACS.
CMake Error at cmake/FindSphinx.cmake:52 (string):
string sub-command REGEX, mode REPLACE needs at least 6 arguments total
to
command.
Call Stack (most recent call first):
docs/CMakeLists.txt:62 (find_package)
Could you advice what could be causing this error?
We try to find Sphinx in case people want to build the new documentation,
but it looks like some part of the detection isn't reliable enough. Can
you
please try changing line 52 of cmake/FindSphinx.cmake to read
string(REGEX REPLACE "Sphinx \\([^)]*\\) ([^ ]+)" "\\1"
SPHINX_EXECUTABLE_VERSION "${SPHINX_VERSION_OUTPUT_VARIABLE}")
and let us know how you go?
Mark
I was able to compile Gromacs 5.0 using same cmake command….
Bests,
Leucer
--
Gromacs Users mailing list
* Please search the archive at
http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before
posting!
* Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
* For (un)subscribe requests visit
https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or
send a mail to gmx-users-requ...@gromacs.org.
--
Gromacs Users mailing list
* Please search the archive at
http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before
posting!
* Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
* For (un)subscribe requests visit
https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or
send a mail to gmx-users-requ...@gromacs.org.
--
Gromacs Users mailing list
* Please search the archive at
http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before
posting!
* Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
* For (un)subscribe requests visit
https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or
send a mail to gmx-users-requ...@gromacs.org.
--
Gromacs Users mailing list
* Please search the archive at
http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting!
* Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
* For (un)subscribe requests visit
https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a
mail to gmx-users-requ...@gromacs.org.
--
==================================================
Justin A. Lemkul, Ph.D.
Ruth L. Kirschstein NRSA Postdoctoral Fellow
Department of Pharmaceutical Sciences
School of Pharmacy
Health Sciences Facility II, Room 629
University of Maryland, Baltimore
20 Penn St.
Baltimore, MD 21201
jalem...@outerbanks.umaryland.edu | (410) 706-7441
http://mackerell.umaryland.edu/~jalemkul
==================================================
--
Gromacs Users mailing list
* Please search the archive at
http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting!
* Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
* For (un)subscribe requests visit
https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a
mail to gmx-users-requ...@gromacs.org.