Hi, Sounds like your choice of dihedrals doesn't match your system. How did you select them?
Mark On Wed, 7 Jun 2017 08:41 RAHUL SURESH <drrahulsur...@gmail.com> wrote: > Dear Users > > When I try to execute ramachandran plot analysis, I get the following note > like "Dihedral around 5809,5816 not found in topology. Using mult=3" > (nearly 30-40 dihedrals). What is it about? > > Input is just protein structure extended upto 150ns. > > -- > *Regards,* > *Rahul Suresh* > *Research Scholar* > *Bharathiar University* > *Coimbatore* > -- > Gromacs Users mailing list > > * Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before > posting! > > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > > * For (un)subscribe requests visit > https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or > send a mail to gmx-users-requ...@gromacs.org. > -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.